Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALHYYCRHCGVKVGSLESSMVSTDSLGFQHLTNEERNDMISYKENGDVHVLTICEDCQEALDRNPHYHEYHTFIQ
4LMY Chain:A ((100-149))
--VNVVCEICGKIA-DFMDVDVMD--I-AKEAH--EQTGYKV--TRIPVIAYGICPDCQA----------------
General information:
TITO was launched using:
RESULT:
Template:
4LMY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23644 for 240 contacts (-98.5/contact) +
2D Compatibility (PS) -5400 + (NN) -1126 + (LL) 1136
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -32384.0 ( -134.93 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_4LMY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LMY-query.scw
PDB file :
Tito_Scwrl_4LMY.pdb
: