Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGSKLQGKITGITNFGAFVELPGGSTGLVHISEVADNYVKDINDHLKVGDQVEVKVINVEKD-GKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFLKDSEDRLSSLKRNTESKRGGRGARRG
4NNH Chain:A ((293-367))
----IGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELSER---VPDQVVQVGDDAMVKVIDIDLERRRISLSLKQANE--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4NNH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39456 for 485 contacts (-81.4/contact) +
2D Compatibility (PS) -7269 + (NN) 1452 + (LL) 2632
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -51691.0 ( -106.58 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_4NNH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NNH-query.scw
PDB file :
Tito_Scwrl_4NNH.pdb
: