Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKEFGAGL-VCAEMVSDKAILYNNARTMGMLYIDEREKPLSLQIFGGKKETLVEAAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAVNKPVTVKMRMGWD--EDHIFAVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDI-------IKEVKQSV-SIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKMAVCKLHLDRLIDLKGENVAVREMRKHAAWYLKGVKGNANVRNEINHCETREEFVQLLDAFTVEVEAKELQNAKVG |
3B0P Chain:A ((2-235)) | --------LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERL--LAFRPEEHPIALQLAGSDPKSLAEAAR-IGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSAL----------IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEA--LFHLKRVDGVMLGRAVYEDPFVL------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129572 for 1783 contacts (-72.7/contact) +
2D Compatibility (PS) -22849 + (NN) -7088 + (LL) 10024
1D Compatibility (HY) -17600 + (ID) 3500
Total energy: -170585.0 ( -95.67 by residue)
QMean score : 0.509
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