Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHNISDIIEQYLKRVLDQNG-KEILEIKRSEIADKFQCVPSQINYVINTRFTSERGYIVESKRGGGGYIRIIKIKMNNEVVLINNIISQINTHLSQAASDDIILRLLEDKVISEREAKMMVSVMDRSVLHIDLPERDELRARMMKAMLTSLKLK
1QBJ Chain:A ((9-70))
------QDQEQRILKFLEELGEGK--ATTAHDLSGKLGTPKKEINRVL--YSLAKKGKLQKE-AGTPPLWKIA----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QBJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37889 for 404 contacts (-93.8/contact) +
2D Compatibility (PS) -6467 + (NN) 760 + (LL) 8604
1D Compatibility (HY) -400 + (ID) 550
Total energy: -35942.0 ( -88.97 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_1QBJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QBJ-query.scw
PDB file :
Tito_Scwrl_1QBJ.pdb
: