Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKKITLACKTCGNRNYTTMKSSASAAERLEVKKYCS--TCNSHTAHLETK
3J0O Chain:F ((6-24))
------------------------------TRKTYCKGKTCRKHTQHKV--
General information:
TITO was launched using:
RESULT:
Template:
3J0O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2551 for 66 contacts (38.7/contact) +
2D Compatibility (PS) -1671 + (NN) 1628 + (LL) 2320
1D Compatibility (HY) -400 + (ID) 400
Total energy: 4028.0 ( 61.03 by residue)
QMean score : 0.101
(partial model without unconserved sides chains):
PDB file :
Tito_3J0O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J0O-query.scw
PDB file :
Tito_Scwrl_3J0O.pdb
: