Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLHELKPSEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPKRGFTNINRKEYAVVNLDKLNGFAEGTEVTPELLLETGVISKLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI
3BBX Chain:L ((1-143))
MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKV-EGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIE--
General information:
TITO was launched using:
RESULT:
Template:
3BBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9939 for 754 contacts (13.2/contact) +
2D Compatibility (PS) -14776 + (NN) -803 + (LL) 540
1D Compatibility (HY) -8000 + (ID) 3400
Total energy: -16500.0 ( -21.88 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_3BBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBX-query.scw
PDB file :
Tito_Scwrl_3BBX.pdb
: