Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
3DL0 Chain:A ((1-216))
MNLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEMGKPIDYVINIQVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLDFYDEKGYLVNVNGQQDIQDVYADLKVLLGGLK-
General information:
TITO was launched using:
RESULT:
Template:
3DL0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86689 for 1674 contacts (-51.8/contact) +
2D Compatibility (PS) -23665 + (NN) -16572 + (LL) 64
1D Compatibility (HY) -30000 + (ID) 10350
Total energy: -167212.0 ( -99.89 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_3DL0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL0-query.scw
PDB file :
Tito_Scwrl_3DL0.pdb
: