Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKDDVIEVEGTIVETLPNAMFKVELENGHTVLAHVSGKIRMHFIRILPGDKVTVELSPYDLTRGRITYRYK
4QL5 Chain:B ((8-73))
------IEVEGKVVDTMPNAMFTVELENGHQILATVSGKIRKNYIRILAGDRVTVEMSPYDLTRGRITYRFK
General information:
TITO was launched using:
RESULT:
Template:
4QL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33677 for 438 contacts (-76.9/contact) +
2D Compatibility (PS) -7289 + (NN) -1612 + (LL) 456
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -54272.0 ( -123.91 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_4QL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QL5-query.scw
PDB file :
Tito_Scwrl_4QL5.pdb
: