Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRPSVKPICEKCKVIRRKGKVMVICENPKHKQKQG
2JU4 Chain:A ((27-34))
----------------------------PPKCKQRQ-
General information:
TITO was launched using:
RESULT:
Template:
2JU4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 322 for 17 contacts (18.9/contact) +
2D Compatibility (PS) -856 + (NN) -1626 + (LL) 2396
1D Compatibility (HY) 0 + (ID) 250
Total energy: -14.0 ( -0.82 by residue)
QMean score : 0.859
(partial model without unconserved sides chains):
PDB file :
Tito_2JU4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JU4-query.scw
PDB file :
Tito_Scwrl_2JU4.pdb
: