Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGITVR------PTIEG----EKLLPVERFGVKVMSMGFFVEENAPVV----WRGPMLGKMLNNFFHEVE-WGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGEREYVFGKGGGDKLAEELNVPLLGRIPLKQPDWD-KDQFAPSVYDENHPIGEIYQDIAKKIDAKMSVQV |
| 4V02 Chain:A ((5-239)) | ------------------------------------------------------------------------------------------------------------IVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAAIGLRNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSLWLLPA------DVIDIEKW---------NKTVEEIKNSGNYDYILVDSPAGI-EKGFQIAVS-PADKALIVVNPEVSSIRDADRVIGLLESMDKRNYKVIVNRIKWEMVKRGAMLSV------EDIVDILKAEIIGIIPEEPKLVDFTNRGEPIVLDEKFPASQAIIDTARRL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115631 for 1787 contacts (-64.7/contact) +
2D Compatibility (PS) -22417 + (NN) -3445 + (LL) 10264
1D Compatibility (HY) -9600 + (ID) 3400
Total energy: -144229.0 ( -80.71 by residue)
QMean score : 0.397
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