Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYSKQWTRIILITSPFAIALSLLLSILYGAKHLSTDIVFTSLIHFDPGNTDHQIIWHSRIPRAAGALLIGAALAVSGALMQGITRNYLASPSIMGVSDGSAFIITLCMVLLPQSSSIEMMIYSFIGSALGAVLVFGLAAMMPNGFTPVQLAIIGTVTSMLLSSLSAAM-SIY-F-QISQDLSFWYSARLHQMSPDFLKLAAPFFLIGIIMAISLSKKVTAVSLGDDISKSLGQKKKTIKIMAMLSVIILTGSAVALAGKIAFVGLVVPHITRFLVGSDYSRLIPCSCILGGIFLTLCDLASRFINYPFETPIEVVTSIIGVPFFLYLIKRKGGEQNG
2NQ2 Chain:A ((15-330))---------------LLLVITAVISLGIGRYSLSVPQI---------DPVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGFS--LYGLFTSTILFGFGTLALVFLFSFK-----SLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSL-SDAEIPISILTALIGAPLFGVLVYKL------


General information:
TITO was launched using:
RESULT:

Template: 2NQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -306942 for 2456 contacts (-125.0/contact) +
2D Compatibility (PS) -30187 + (NN) -1835 + (LL) 1372
1D Compatibility (HY) -28400 + (ID) 4400
Total energy: -370392.0 ( -150.81 by residue)
QMean score : 0.381

(partial model without unconserved sides chains):
PDB file : Tito_2NQ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NQ2-query.scw
PDB file : Tito_Scwrl_2NQ2.pdb: