Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEY-LDKTYEVTVPTD--KIAIT--GSVESMEDAKLLDVHPQGAISFSGKFPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPE--KTLQKIS-TAGTTIPVSHISSNWKENMMLLAQLTGKEKKAKKIIADYEQ---DLKEIKTKINDKAKDSKALVIRIRQGNIYIY-PEQVYFNSTLYGDLGLKAPNE--VKAAKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHV-YVNSVDPLAQGGTAWSKVRFLKAAAEKLTQN |
| 3GFV Chain:A ((14-295)) | -----------------------------------KEQITVKHQLDKN-GTKVPKNPKKVVVFDFGSLDTLDKLGLDDIVAGLPKQVLPKYLSKFKD--DKYADVGSLKEPDFDKVAELDPDLIIISARQSESYKEFSKIAPTIYLGVDTAKYMESFKSDAETIGKIFDKEDKVKDELANIDHSIADVKKTAEKLN-----KNGLVIMANDGKISAFGPKSRY---GLIHDVFGVAPADQNIKASTHGQSVSYEYISKTNPDYLFV-IDRGTAIGETSSTKQVVENDYVKNVNAVKNGHVIYLDSATWYLSGGGLESMTQMIKEVKDGL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30391 for 2199 contacts (-13.8/contact) +
2D Compatibility (PS) -29610 + (NN) -21579 + (LL) 3620
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -94610.0 ( -43.02 by residue)
QMean score : 0.439
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