Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGIVVIVLVRMASQYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSRSGTPVEEAQQKTIEAITKAINYMAKRRIGALLTIERD-TGMGDYIETGIPLNAKVSSELLINIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFI-SKELGTRHRAAVGISEVTDSLTIIVSEETGGVSVAKNGDLHRELTEEALKEMLEAEFKKNTRDTSSNRWYWRGKKNG |
| 4YVZ Chain:A ((44-155)) | -------------------------------------------------------------------------------------------------------------------LRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYEL-----SKMDGAIVLSEDITKIYYANVHLVPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISL------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75778 for 813 contacts (-93.2/contact) +
2D Compatibility (PS) -11772 + (NN) -3320 + (LL) 14460
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -84760.0 ( -104.26 by residue)
QMean score : 0.526
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