Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVSLSLSSLLTLFFIMLMASGISGLLFLHPRVPLSFVRIHIGILALPLLVSLLILANSGVSGNVGPWHLDSLACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWGATLVGLTLLIRLNSAWQVASEAAKISGRLFLLSWFSLFFAMMWLFHATGQWQLSLVVTNESLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESI-VAPTPVSAIMHAGLVNAGGII-LTRFSPLFHGGIASIILLLLASISVLIGTGISLVQVDYKRQLVGSTIGQMGFMLIQCALGAYIAAIIHLILHGLFKATLFLQAGSAVGRHEVSTRTNERTSYLWVMAGRILSLVIGVAFWLTAPGDGYHLISALILGWSLSVSWDQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKWLHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSVESHPDYLKQYIS |
| 4HE8 Chain:N ((50-304)) | ----------------------------------------------------------------FGPYAVDGVSQVFTLLALLG----ALWTVGLVR--SGRFEFYLLVLYAALGMHLLASTRHLLLMLVALEALSLPLYALATWRR--GQGLEAALKYFLLGALAAAFFLYGAALFYGATGSLVLGAPG--------EGPLYALALGLLLVGLGFKAALAPFHFWTPDVYQGSPTPVVLFMA-TSVKAAAFAALLRVAAP------PEALALLVALSVVVGNLAALAQKEAKRLLAYSSIAHAGYMALALYTGNAQALGFYLLTYVLATGLAFAVLSQISP--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -295201 for 2242 contacts (-131.7/contact) +
2D Compatibility (PS) -26426 + (NN) -11711 + (LL) 20616
1D Compatibility (HY) -8800 + (ID) 2850
Total energy: -324372.0 ( -144.68 by residue)
QMean score : 0.268
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