Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKSKGSIESEISKSITQWEKDYLGRGSVSVKTDILRDMIIVNLKGILTPAEYVVCGSKEGMLSIKQTRSELVESGIEGLKDIILKITGEKVKSFHTDLSSRTGERVMVFKLCNDLEKNLEKIL |
2OPA Chain:A ((13-44)) | -----DEQKRNLVEKVTEAVKETTGASEEKIVVFIEE--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5971 for 138 contacts (43.3/contact) +
2D Compatibility (PS) -3462 + (NN) 620 + (LL) 6940
1D Compatibility (HY) 800 + (ID) 200
Total energy: 10669.0 ( 77.31 by residue)
QMean score : 0.331
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