Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIEVFKALSNESRLQILQWLKEPDRHFAPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLTILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI
4OOI Chain:A ((20-99))
-KAVVLLKAMANERRLQILCMLLDNE---------------LSVGELSSRLELSQSALSQHLAWLRRDGLVNTRKEAQTVFYTLSSTEVKAMIELL----
General information:
TITO was launched using:
RESULT:
Template:
4OOI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49428 for 555 contacts (-89.1/contact) +
2D Compatibility (PS) -8608 + (NN) -1906 + (LL) 1228
1D Compatibility (HY) -8000 + (ID) 1150
Total energy: -67864.0 ( -122.28 by residue)
QMean score : 0.672
(partial model without unconserved sides chains):
PDB file :
Tito_4OOI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OOI-query.scw
PDB file :
Tito_Scwrl_4OOI.pdb
: