Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLKALPRRAEVQYDCLDRTLETQENVNLNIRVNVKEVATWGVNTCIISLKGLD----NADDRFVLPEV----NTALALFPLSIAADCLLMLPCISVVMSISSVMKSVTVE
2ZJ3 Chain:A ((301-355))
------------------------------------QQVVARQGRPVVICDKEDTETIKNTKRTIKVPHSVDCLQGILSVIPLQLLAFHLA---------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZJ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16987 for 213 contacts (-79.8/contact) +
2D Compatibility (PS) -5134 + (NN) -930 + (LL) 5400
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -19751.0 ( -92.73 by residue)
QMean score : 0.217
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJ3-query.scw
PDB file :
Tito_Scwrl_2ZJ3.pdb
: