Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGSGKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYS-EVSHDDRDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYKLSGVDRLKVRGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQSYQNGSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADIKELRGTHSIYLYQPDQIYKLSMEFMRKVR |
4MEB Chain:A ((42-164)) | -----------------------------------------------IESEGVKLHYVEGGSKGTPIVFIHGFGSTWKMWEPVML--SYMKDHKVIAIDLPGLGQSGPILNDDYSAENTSKILIGAIKKIAGKGPIYYVSHSLGNTASYPLVANNQGYIKKAVFMDSPIPDR---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MEB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42808 for 1005 contacts (-42.6/contact) +
2D Compatibility (PS) -13652 + (NN) -12266 + (LL) 16736
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -58640.0 ( -58.35 by residue)
QMean score : 0.455
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