Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQDSMQFAAVESGLRFYQAYDQSLSLWPIESEAFYVSTRFGKTHIIASGPKDAPSLILLHGGLFSS---AMWYPNIAAWSSQFRTYAVDIIGDKNKSIPSAA--METRADFAEWMKDVFDSLGLETAHLAGLSLGGSHIVNFLLRAPERVERAVVISPAEAFISFHPDVYKYAAELTGARGAESYIKWITGDSYDLHPLLQRQIVAG-----------VEWQDEQRSLKPT-------------ENGFPYVFTDQELKSIQVPVLLMFGEHEAMYHQQMAFERASVLVPGIQAEIVKNAGHLLSLEQPEYVNQRVLSFLCGGIK
4LXG Chain:A ((6-273))--------------------------------ESKFIDCDGIRTHYIEMGEGD--PLVLVHGGGAGADGRSNFADNFPIFARHMRVIAYDMVGFGQTDAPDPAGFAYTQAARTDHLISFIKALGLSKICLIGNSMGGTTACGAALKAPELIDRLVLMGAA---VNISPD------DMVA--DDLAAVM-----SYDGSEEGMRKIIAALTHSYQPTDDIVHYRHEA-SLRPTTTAAYKATMGWAKQNGLYY--SPEQLASLTMPVLVLGGKNDVMVPVRKVIDQI-LAIPQAIGHVFPNCGHWVMIEYPEEFCTQTLHFF-----


General information:
TITO was launched using:
RESULT:

Template: 4LXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1353 -179643 -132.77 -757.99
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -132.77
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_4LXG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LXG-query.scw
PDB file : Tito_Scwrl_4LXG.pdb: