Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSHSVVCIGELLIDFFCTDVDVDLMEGRQFLKSAGGAPANVSAAIAKLGGDAAFSGKVGKDPFGYFLKRTLDAVHVDTSMLVMDEKAPTTLAFVSLKQNGERDFVFNR--GADALFTLEDIDQEKLNEAKILHFGSATALLSDPFCSAYLRLMSIAKDNGQFISFDPNYREDLWRGRVSEFVSVAKKAIAVSDFVKVSDEELEIISGV--KDHEKGVAILHEIGANIVAVTLGKSGTLLSNGKDREIIPSIPVTSIDSTGAGDAFVGAALYQLANTDQIQSVDADFVKLREIVA----FANKVGALVCTKIGAIDALPSLDEIGVSL
3LKI Chain:A ((6-322))----TILCFGEALIDMLAQPL-VKKGMPRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVAL--HGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDAD-IAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENP-ASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGGEVPTF----------GDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGALAV----AFTAMPMLSEV----


General information:
TITO was launched using:
RESULT:

Template: 3LKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1630 -190114 -116.63 -648.85
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -116.63
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_3LKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LKI-query.scw
PDB file : Tito_Scwrl_3LKI.pdb: