Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKHMLIAGGGIGGLSAAISLRKAGFSVTLCEAASENRKTGAGILQPQNALAVLKELGVFEDCCKHGFQTEWFKTFDEQGNLLFQVSESFLDDSLPGRNNILRKTLNDILMKHAEAVGVDIKWGKKVVAYEETAESVTALC-EDGEKMQADILAGFDGIHSVVRDKMLQKETE---------------KEHLGMGAWRFYIELPDYTFEDATFMYRSGDTQIGVVPLAQHAGYVFVLQPCTSDYWDEEDTRFDRVKEILSGFRGLDFVTKHMSKQHPVIFNKLEQVAVQEPWHKGRVIIGGDAAHAGAPTLAQGAAMAIEDAIVLAEELQNHADHETALQAYYKRRAPRALKVQNLSSEIVRRRLKGEPGAEELIGECYAVLREGY
4JY3 Chain:A ((16-350))-----VAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKSV---SKETF--NGLPWRI-MTRSHLHDALVNRARALGVDISVNSEAVA----ADPVGRLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYS---------PCNENELYLGLMAPAADPRGSSVPIDLEVWVEM---FPFLEPCLIEAAKLKTARYDKYETTKL-DSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPITDRCQALSGDYAANR----------------------


General information:
TITO was launched using:
RESULT:

Template: 4JY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1771 -156988 -88.64 -492.13
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -88.64
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_4JY3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JY3-query.scw
PDB file : Tito_Scwrl_4JY3.pdb: