Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLGARIFKTGIAITLALYLASWIGLPAPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATVFGLIFGPSPIMIGLTAVIVITIMLKLKIEHTISIALVTVIAILESAGDDFLMFALIRTSTVILGVLSSFIVNLVFLPPKYETKLIHNTVENTEEIMKWIRLSMRQSTEHSILKEDIEKLKEKMIKLDQTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHRLENE-IYH-MPEEFQET----LTEELDYLLYWHERILM--RFVGKIKPHDDAVEEGIRYKQLLTKSFLK-NQQNTDEELIDYNMLNIMASAVEYREQLEHLETLITSFQTYHPKDCEIETEE
5AJ3 Chain:E ((268-400))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FRKA---KNRAVHYLHYIERYEDHTIYHDISLKFKRTHIKMKKQPRGYGLHCHRAIMTICRLIG-IKDLYAKVSGSVNMLNLTRGLFLGLSRQETHQQLADKKSLHV----VEFREECGPLPIVVASPQGALRKDPEPEDE-


General information:
TITO was launched using:
RESULT:

Template: 5AJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 352 -17954 -51.00 -144.79
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain E : 0.53

3D Compatibility (PKB) : -51.00
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.026

(partial model without unconserved sides chains):
PDB file : Tito_5AJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AJ3-query.scw
PDB file : Tito_Scwrl_5AJ3.pdb: