Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVNFYDVAYDLENALRGSEEFTRLKNLYDEVNADESAKRMFENFRDVQLRLQQKQMAGEEITQEEVTQAQKTVALVQQHEKISQLMEAEQRMSMLIGELNKIIMKPLEELYGSVEG
4JFA Chain:A ((339-374))---------------------------------------------------------------------------LLEDDNKLNEIGEKYKKGEMLSGEIKKILIDVLTEL------


General information:
TITO was launched using:
RESULT:

Template: 4JFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 50 -8805 -176.10 -244.58
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -176.10
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.671

(partial model without unconserved sides chains):
PDB file : Tito_4JFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JFA-query.scw
PDB file : Tito_Scwrl_4JFA.pdb: