Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFLIGANGQIGQRLVS-LFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALKPY---YVAKHYADKILEASGLTYTIIRPG---------GLR--NEPGTGTVSAAKDLERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL
2JL1 Chain:A ((1-198))FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDY-NQPESLQKAFAGVSKLLFISGP----HYDNTLLIVQH--ANVVKAARDAGVKHIAYTGYAFA------EESIIPLAHVHLATEYA---IRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNS-VTRNELALAAATVLTEEGHENKTYNL--------------


General information:
TITO was launched using:
RESULT:

Template: 2JL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 865 -123214 -142.44 -673.30
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -142.44
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_2JL1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JL1-query.scw
PDB file : Tito_Scwrl_2JL1.pdb: