Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKALITYASMSGNTEDIAFIIKDTLQEYELDIDCVEINDMDASCL-TSYDYVLIGTYTWGDGDLPYEAEDF---FEEVKQIQLNGLKTACFGSGDYSYPKFCEAVNLFNVMLQEAGAAVYQETLKIELAPETDEDVESCRAFARGFLAWADYMNKEKIHVS
1J8Q Chain:A ((1-134))-AKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQ-DDFIPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARD--------------------------


General information:
TITO was launched using:
RESULT:

Template: 1J8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 683 -73243 -107.24 -563.40
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -107.24
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_1J8Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J8Q-query.scw
PDB file : Tito_Scwrl_1J8Q.pdb: