Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQWMELANRVLAGAEVTDEEALSILHCPDEDILLLMHGAFHIRKHFYGKKVKLNMIMNAKSGLCPENCGYCSQSAISKAPIESYRMVNKETLLEGAKRAHDLNIGTYCIVASGRGPSNREVDQVVDAVQEIKETYGLKVCACLGLLKPEQAKRLKDAGVDRYNHNLNTSQRN-HSNITTSHTYDDRVNTVEIAKESGLSPCSGAIIGIK-ETKQDVIDIAKSLKALDADSIPVNFLHAIDGTPLEGVNELNPLYCLKVLALFRFINPSKEIR--------ISGGREVNLRSLQPLGLYAANSIFVGDYLTTAGQEETEDHKMLSDLGFEVESVEEMKASLSAKS
5FF4 Chain:A ((45-294))-----------------------------------LFKLADEIRRKYVGDEVHIRAIIEF-SNVCRKNCLYCGLRRDNKN-LKRYRMTPEE-IVERARLAVQFGAKT-IVLQSGEDPYYMP-DVISDIVKEIKKM-GVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLR------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1183 -97298 -82.25 -405.41
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -82.25
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_5FF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FF4-query.scw
PDB file : Tito_Scwrl_5FF4.pdb: