Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTYESKTGNVKRFVKALQQEFDVEAIEIT----DDTIINQEFIHITYTIG----FGEVPERTLSFINKNKNK--IRGVAVSGNKVWGDNYGLAGDKLSAKFHTPLLLKFELSGTKQDLQKIIQEVQLIDKHNTKLDQAQ
3N3A Chain:C ((27-145))--FSSSSENTQRFIERL----GLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGV--------------


General information:
TITO was launched using:
RESULT:

Template: 3N3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 480 12311 25.65 112.94
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : 25.65
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_3N3A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N3A-query.scw
PDB file : Tito_Scwrl_3N3A.pdb: