Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDYSQFPRKNILCVDMKSFYASVSAVTMGLNPL--TCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSRL-FEIPEDPRIHIVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSIDESFLDAGKE-----DPEEMAKAIQSSMWREFGLMCTVGIGDNMLLSKLALDLESKKTKSGIARWRYEDVPNKLWKVRPLSKMWGIGGRMERNLNRMGISTIGQLAKFPLELLEKKFGIMGNQLYYHAHGIDLSEIGAPLMQGQISFGKSQILLRDYTRSEEIKAVLLEICEEVARRARTHNKVGRTISLGIGYSKDELGGGFHRSKTIDLPTSITMDIYRCCLMLFNKFYSGKTVRSVSVTLSNIEDDVNQQLSLFEVDNEKRRKLGFVMDGIRSKYGSKAILRAVSYTPAGTALQRAGLTGGHKS
4Q45 Chain:F ((3-274))---------RKIIHVDMDCFFA---AVEMRDNPALRDIPIAIGGSRERRGVISTANYPARK--FGVRSAMPTGMALALCPHLTLLPGRFDAYKEASNHIREIFSRYTSR--IEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVIT---PAEVPAFL-QTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQACDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRK--SVGVERTMAEDIHHWSECEAIIERLYPELERR----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1227 -713 -0.58 -2.70
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain F : 0.68

3D Compatibility (PKB) : -0.58
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.393

(partial model without unconserved sides chains):
PDB file : Tito_4Q45.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q45-query.scw
PDB file : Tito_Scwrl_4Q45.pdb: