Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNMDFNLFMNDIVRQARQEITAAGYTELKTAEEVDEALT-K--KGTTLVMVNSVCGCAGGIARPAAYHSVHYDKRPDQLVTVFAGQDKEATARARDYFEGYPPSSPSFAILKDGKIMKMVER----HEIEGH--EPMAVVAKLQEAFEEYCEEV
2AV4 Chain:A ((22-139))-----------------------MLQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPD-CMKMDELLYKV-A-DDIKNF--CVIYLVDITEVPDFNTMYEL--YDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR------


General information:
TITO was launched using:
RESULT:

Template: 2AV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 459 -18277 -39.82 -167.67
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -39.82
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_2AV4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AV4-query.scw
PDB file : Tito_Scwrl_2AV4.pdb: