Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSIEKVSKNLIEEAYLTKASDIHIV----PRER-DAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLTLKLK-EGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQYAKKHFNRNIVTLEDPVET----RDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLHTRDAKGAIYRLLE-FGINMNEIEQTVIA-----IAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGNHANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
2GSZ Chain:A ((7-336))----------IIKEAIELGASDIHLTAGAPPAVRIDGYIKFLKDFPRLTPEDTQK---------LAYSVMSEKHRQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPA-EIPEFKKLGLPDK----VLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTK-SFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLL----PKIGGGRVLAYELLIPNT---AIRNLIRENKLQQVYSLMQ-------MQTMNQTLYKLYKQGLITLED----------


General information:
TITO was launched using:
RESULT:

Template: 2GSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1533 20860 13.61 67.95
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 13.61
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.396

(partial model without unconserved sides chains):
PDB file : Tito_2GSZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GSZ-query.scw
PDB file : Tito_Scwrl_2GSZ.pdb: