Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVTVPHKVSIMDYLDHIDESAKVLGAVNTVRREGDKLVGYNTDGEGFVKSLMKVLDKPISELSFLMIGAGGAARAIFTTIVRNTPKKFDICNR----------TLEKAKRLTEATPSFHNKEVLSIKEAEE-RLEQYDVIIHT--TSVGMYPNVDDVPL-SLQRAASSAVVCDIVYNPIQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVIGKLGGTEC
3TNL Chain:A ((38-315))--ELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGK-KMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDC-----KAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF--------


General information:
TITO was launched using:
RESULT:

Template: 3TNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1502 -76089 -50.66 -288.21
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -50.66
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_3TNL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TNL-query.scw
PDB file : Tito_Scwrl_3TNL.pdb: