Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMTMTQQMITIAMVVLGTMLTRFLPFMIFPSGKPTPKYVQYLGKVLPSAVIGLLVIYCLKDVSLLSGSHGIPELVGAAAVVLLHLWKKNMLLSIAGGTVVYMVLVQLVF
2KV5 Chain:A ((10-26))-----------------------------------------------------------------------APIFVGLVLEMISRVLD----------------------


General information:
TITO was launched using:
RESULT:

Template: 2KV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3 -634 -211.33 -37.29
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.37

3D Compatibility (PKB) : -211.33
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.377

(partial model without unconserved sides chains):
PDB file : Tito_2KV5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KV5-query.scw
PDB file : Tito_Scwrl_2KV5.pdb: