Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSKFEASIDNLKEIEMNAYAYELIREIVLPDMLGQDYSSMMYWAGKHLARKFPLE-SWEEFPAFFEEAGWGTL-----TNVSA-KKQELEFELEGPIISNRLKH-QKEPCFQLEAGFIAEQIQLMNDQIAESYEQVKKRADKVVLTVKWDMKDPV
2BJN Chain:A ((36-159))---------------------------------------TKLENMGFRVGQGLIERF-ELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLTQM--EHASKYLAFTCGLIRGGLSN-LGIKSIVTAEVSS-MPACKFQVMIQK----


General information:
TITO was launched using:
RESULT:

Template: 2BJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 372 6338 17.04 63.38
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 17.04
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_2BJN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BJN-query.scw
PDB file : Tito_Scwrl_2BJN.pdb: