Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIEST---QELEKAVKDDWSVFMFSADWCPDCRFVEPFLPELEANFPEFTYYYVDRDKFIDTCAEWEIYGIPSFVVFNEGKEVNRFVSKDRKTKEEIEQFLTDSLAKA
4OO4 Chain:A ((2-98))VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCADVASESEVKSMPTFQFFKKGQKVGEFSGANKEKLE-------------


General information:
TITO was launched using:
RESULT:

Template: 4OO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 380 -5276 -13.88 -56.12
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -13.88
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_4OO4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OO4-query.scw
PDB file : Tito_Scwrl_4OO4.pdb: