Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMVLAFLGFLACLIALGYGLYHLVRYVLKKEKRFSKRLFWPLFIGGLVLLFTGAALAEPDTAAANAEKKYSALNAEYKNLTKEHEELEKEYKSVSSEAKKLKD------NKEDQDKLEKLKNENSDLKKTQKSLKAEIKELQENQKQLKEDAKTAKAENETLRQDKTKLENQLKETESQTASSHEDTGSSSNNTSKSDETKTADKAEGCNIKGSRNGIYHTPGSTYYDRTTDPAEMFCSVEEAEAAGYRAPKR
3ZMS Chain:A ((470-534))-------------------------------------------------------------------------------NLKEKIKELHQQYKE-ASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEAN-------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ZMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 83 13648 164.43 231.32
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 164.43
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.630

(partial model without unconserved sides chains):
PDB file : Tito_3ZMS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZMS-query.scw
PDB file : Tito_Scwrl_3ZMS.pdb: