Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLNDILEFNKTFTEQREYEKYQTSKFPDKKMAILSCMDTRLVELLPHAMNLRNGDVKIIKSAGALVTHPFGSIMRSILVAVYELNADEVCVIGHHDCGMSKISSKSMLEKIKARGIPEERIETIKYSGVDFDQWFKSFDSVEASVKDSVDVIKHHPLFPENVPVHGLVIDPKTGKLDLIVNGYNN
4YF5 Chain:A ((35-168))----------------------------PSKHIAIVACMDARLD--VYRMLGIKEGEAHVIRNAGCVVTD---DVIRSLAISQRLLGTREIILLHHTDCGMLTFTDDDF-----KRAIQDE-------TGIRPTWSPESYPDAVEDVRQSLRRIEVNPFVTKHTSLRGFVFDVATGKLN--------


General information:
TITO was launched using:
RESULT:

Template: 4YF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 592 -90020 -152.06 -671.79
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -152.06
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_4YF5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YF5-query.scw
PDB file : Tito_Scwrl_4YF5.pdb: