Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIGVIDYGMGNLYSVSKALERVGVPYFVSEKPEE--LKEADAFILPGVGSFGDAMDNLGYTKLDQLIHDMVSEGRLLLGICLGMQLLFEESEENGTASGLGLLKGKAVRLKAEDEKGNKLKVPHMGWNRLSFHNESPLLTKTEQGYAYFVHSYYI-------DGMEENAL-LASADYGV-RVPAVVGKRNVFGAQFHPEKSSTVGMSILTQFTKMAAEQKVKK
1OX6 Chain:A ((6-238))VVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGICVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEK-----PVPEIGWNSC-IPSENLFFGLDPYKRYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKNNIFATQFHPEKSGKAGLNVIENFLKQQS------


General information:
TITO was launched using:
RESULT:

Template: 1OX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1051 -27212 -25.89 -136.06
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -25.89
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_1OX6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OX6-query.scw
PDB file : Tito_Scwrl_1OX6.pdb: