Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQACIAIIIILLTVAAYLAMVKLYKRFPLPFLIPVLTTTILIVAALMMFHVSYEGYMIGGKWINSLLGPAVVALAYPLYKQWHIIVKHCVPILGGVLVGLCMGMISGLIFAEAFGIDHDLLLSILPKSITTPVAIQIAAGLGGVPSMTVVFVMIAGFSGVILGPLFLK-WLRIRSSL------GQGIA----LGSASH--------ALGTSKALEYGELAVSMSSVSMTLCAVLGSFFGPLVVWLFHI
2W36 Chain:A ((76-144))-----------------------------------------------------------------------------------------------------------------------------------------------------ITFPYIPGLLAFREGPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLYG-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2W36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 118 -11192 -94.85 -223.84
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.42

3D Compatibility (PKB) : -94.85
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.42
QMean score : 0.085

(partial model without unconserved sides chains):
PDB file : Tito_2W36.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W36-query.scw
PDB file : Tito_Scwrl_2W36.pdb: