Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVRHLGLRDFRSWAC--VDLELHPGRTVFVGPNGYGKTNLIEALWY---STTLGSHRVSADLPLIRVGTDR----AVISTIVVNDGRECAVDLEIATGRVNKARLNRSSV-----RSTR-DVVGVLRAVLFAPEDLGLV-RGD--------PADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVFDTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPSEQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIPAGWDARRVHIDVRADDTGSMSVVLP |
| 3KTA Chain:A ((3-169)) | -YIEKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASRISDLIFAGS--PAKYAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDGRSSYWLNGRRATRSEILDILTAAMISPDGYNIVLQGDITKFIKMSPLERRLLIDDIS-----GI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56558 for 863 contacts (-65.5/contact) +
2D Compatibility (PS) -14698 + (NN) -2336 + (LL) 19920
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -64272.0 ( -74.48 by residue)
QMean score : 0.365
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