Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRA-RPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
3N2S Chain:A ((119-195))
-QNMSIAAESMGLGICYIGGIRNELDKVTEVLQTPDHVL---PLFGLAVGHPANLSGKKPRLP-------------KQAVYHENTYNVNTDDFR------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N2S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24530 for 335 contacts (-73.2/contact) +
2D Compatibility (PS) -7400 + (NN) 2763 + (LL) 4224
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -29393.0 ( -87.74 by residue)
QMean score : -0.040
(partial model without unconserved sides chains):
PDB file :
Tito_3N2S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N2S-query.scw
PDB file :
Tito_Scwrl_3N2S.pdb
: