Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQI-TAGGQLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQLTAAP-TIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDS---------------PPRPTPLQVAESTVG-PIPDSAALGMTSIGQKDVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGA-IPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVE-NGADRLSATGGALAAPIGRAVIEAALQGEP |
| 4R3J Chain:A ((54-458)) | -------------------------------------------------VQRGAIITSDGVTLAESVKQD-D-TYVRNYPHDGMASHTVGYISTQYGTAGIESSMNETLTG-------------------TGSSVVLTINSQMQAVAEAALQG-----YSGSIVVMDPSTGAVLAKASSPSY-----------THAELGTIIESGTGSQLVDRTTQALYSPGSSFKTVTLAAGIDTHKTTLDTTYSAPGTMEIGGGT--IHNYANE---DMGTIPLREAFARSSNTALAQLGVALGADNLVSYARAFGYGTALGQDFSTTPSLMPNPAEMTTWELAWASCGLPVGEHAS-------PAGPQTTVMQNAVIAAAIANGGVVMNPYIVDRVLSPEGAVVSTTSPKSLGQAVSADTAAQVREAMLGVVESGTGMGARVPGVKIAGKTGTA----D--NGNFNSFFIGFAPYDHPTLVVSVVIEGNGENVL------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105312 for 3179 contacts (-33.1/contact) +
2D Compatibility (PS) -39545 + (NN) -25530 + (LL) 6844
1D Compatibility (HY) -19200 + (ID) 7200
Total energy: -189943.0 ( -59.75 by residue)
QMean score : 0.504
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