Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTLAAGSWQSAQYALRRETASPTANCVGSCAVCTQACH
2CX1 Chain:A ((78-139))
------------------------------PTLQCLKAFGVDWLKGVVLVDKGAAIALAKGAH-------LMIPGVVGVEGSFTRGDVVAALYHETRTP----------------
General information:
TITO was launched using:
RESULT:
Template:
2CX1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29782 for 379 contacts (-78.6/contact) +
2D Compatibility (PS) -6313 + (NN) -2137 + (LL) 4608
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -37774.0 ( -99.67 by residue)
QMean score : -0.039
(partial model without unconserved sides chains):
PDB file :
Tito_2CX1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CX1-query.scw
PDB file :
Tito_Scwrl_2CX1.pdb
: