Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNSVYTSNAQLVVYRLI----GDF-DPAEAIT----HGYIDSQKLLAWQTTNASMANFDGFPSSIIEGTYRENDMTLNTSRRHVIATSGADKYLVSLSVTTALSQAVTD-GPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPPAGTLTPVPPR |
| 1V2B Chain:A ((14-177)) | ------------------------------------------------------------------------------------------------------------------------------GDGFKLQIPSKWNPNKEVEYPGQVLRFEDN---FDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLL-----AVAIANVLETSTAEVGGKQYYYLSILTRT--GGKHQLV--TATVNDGKLY--ICKAQAGDKRWFKGAKKFVENTATSFSLA--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48167 for 951 contacts (-50.6/contact) +
2D Compatibility (PS) -14103 + (NN) -4864 + (LL) 5424
1D Compatibility (HY) 800 + (ID) 850
Total energy: -61760.0 ( -64.94 by residue)
QMean score : 0.396
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