Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
1X3G Chain:A ((3-120))
--GDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRMFDR----WKDGEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48795 for 704 contacts (-69.3/contact) +
2D Compatibility (PS) -12093 + (NN) -2474 + (LL) -940
1D Compatibility (HY) -13200 + (ID) 5350
Total energy: -82852.0 ( -117.69 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_1X3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X3G-query.scw
PDB file :
Tito_Scwrl_1X3G.pdb
: