Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHRELDGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLPYRITSRVTALKPNELVEWSH---PLG-HRWRWEFESLSPTLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYARGRA
2D4R Chain:A ((3-146))----------------------------------------------------------------------------EVRAERYIPAPPERVYRLAKDLEGLKPYLKE--VESLEVVARE-GARTRSRWVAVAMGKKVRWLEEEEWDDENLRNRFFSPEGDFDRYEGTWVFLPEGE-GTRVVLTLTYELTIPIF--GGLLRKL-VQKLMQENVESLLKGLEERVLAAS-


General information:
TITO was launched using:
RESULT:

Template: 2D4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23995 for 1019 contacts (-23.5/contact) +
2D Compatibility (PS) -15144 + (NN) -3574 + (LL) 3424
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -43539.0 ( -42.73 by residue)
QMean score : 0.343

(partial model without unconserved sides chains):
PDB file : Tito_2D4R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D4R-query.scw
PDB file : Tito_Scwrl_2D4R.pdb: