Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAQATTAGSFNHHASTVLQGCRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAG----VLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA |
4AIN Chain:A ((210-286)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACSLGLGALQIGAGL--SAAN--EDPSDWTIVGIVSVLTLAFIFSAIS---KGIQYLSNANMVLAALLAIFVF------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39307 for 310 contacts (-126.8/contact) +
2D Compatibility (PS) -6473 + (NN) -2112 + (LL) 12016
1D Compatibility (HY) -8400 + (ID) 1150
Total energy: -45426.0 ( -146.54 by residue)
QMean score : 0.059
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