Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELILCFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKAS-SRFRKPLNPQK-FSARLLCRDLQVIERTWRYLKVPCVIEFWDEN---GG---AASGEIELAALNIP |
| 5DM5 Chain:A ((63-131)) | --------------------------------------------------------------------------------------------------------------------RVVTVRVDGMTFLKPVAVGDVVCCYARCIKTG-----HS--SITINIEVWVKKEPIGQRYRATEAVFTYVAVD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6941 for 297 contacts (-23.4/contact) +
2D Compatibility (PS) -5649 + (NN) 4058 + (LL) 9460
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -2772.0 ( -9.33 by residue)
QMean score : 0.297
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