Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQFNGA--EVDITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKIIVAGSSAEYG-----FVDP-SEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIFNCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKGEAGADYNVG---GSIAYEMGDVLKQVIAACKRDDIVPEVDPALLRPTDEKIIYGDCSKLAAITGWQQEICLTQTIADMFDYWRSKSESALMV |
| 4ZRN Chain:A ((4-312)) | MNILVTGGAGFIGSHVVDKLIENGYGVIVVDNLSSGKVENLNRNALFYEQSIEDEEMMERIFSLHRPEYVFHLAAQASVAISVREPARDAKTNIIGSLVLLEKSIKYGVKKFIFSSTGGAIYGENVKVFPTPETEIP-------HPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHI-FGDGEYVRDYVYVDDVVRANLLAMEKGDNEV-FNIGTGRGTTVNQLFKLLKEITGYDKE----PVYKPP--RKGDVRKSILDYTKAKEKLGWEPKVSLEEGLKLTVEYFRKTLE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156736 for 2594 contacts (-60.4/contact) +
2D Compatibility (PS) -31829 + (NN) -12911 + (LL) 2020
1D Compatibility (HY) -13600 + (ID) 4300
Total energy: -217356.0 ( -83.79 by residue)
QMean score : 0.484
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