Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPN-GVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVA--VGEPVVAMGNSGGQGGTPRAVPGRVVALGQT-VQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTA--ASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIG-----PTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 3MH6 Chain:A ((88-324)) | ------------------------------------------------------------------------------GSGVIIDADKGYVVTNNHVVDNATVIKV-QLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGET--VTSGIVSALGRSGLNA--------ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNI---GIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAAL------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92233 for 1691 contacts (-54.5/contact) +
2D Compatibility (PS) -25164 + (NN) -14298 + (LL) 5856
1D Compatibility (HY) -14000 + (ID) 4300
Total energy: -144139.0 ( -85.24 by residue)
QMean score : 0.232
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