Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFPRTLAILAAAAALVVACSHGGTPTGSSTTSGASPATPVAVPVPRSCAEPAGIPALLSPRDKLAQLLVVGVRDAADAQAVVTNYHVGGILIGSDT-----DLTIFDGALAEIVAGGG-PLPLAVSVDEEGGRVSRLRSLIGGTG---PSARELAQTRTVQQVRDLARDRGRQMRKLGITIDFAPVVDVTDAPDDTVIGDRSFGSDPATVTAYAGAYAQGLRDAGVLPVLKHFPGHGRGSGDSH-NGGVTTPPLDDLVGDDLVPYRTLVT----QAPVGVMVGHLQVPGLTGSEPASLSKAAV-NLLRTGTGYGAPPFDGPVFSDDLSGMAAISDRFGVSEAVLRTLQAGADIALWVTTKEVPA-VLDRLEQALRAGELPMSAVDRSVVRVATMKGPNPGCGR |
4ZM6 Chain:A ((33-344)) | ---------------------------------------------------------------------------------LIENHNLGSIILFSRNIATPKQVQKLTHSLQQIARNAGHKRPLFIAVDQENGVVRRL----GDSGTYLPGNMALGALGSSTAARNVAMAISKELLTLGMNWNLAPVLDVNNNPLNPVIGVRSYGQDPELVARMGLAQVEGYQRGKVATSIKHFPGHGDTATDSHLDVPVINKTLEELDKTELVPFKKALEAGGIACPTSVMVGHMLLPHFNKDVVSSIAPEIVRDLLRRRFGY-----KGVIITDCLE-MDAVKETVGTPKGALMALQAGNDMAMISHTLAFQKDAFKVLYSALQEGQLDKDEIRQSLQRVAQLK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118143 for 2532 contacts (-46.7/contact) +
2D Compatibility (PS) -31954 + (NN) -19215 + (LL) 4372
1D Compatibility (HY) -21600 + (ID) 4800
Total energy: -191340.0 ( -75.57 by residue)
QMean score : 0.501
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